Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015886357.1_cds_XP_016440493.1_35949
CDS Infomation	[gene=LOC107766253] [db_xref=GeneID:107766253] [protein=switch 2-like] [protein_id=XP_016440493.1] [location=complement(join(60504..60826,61290..61548,61652..61927,62117..62243,63250..63497,64202..65126,65355..65461,66828..67211))] [gbkey=CDS]
Sequence	ATGTCTTTAAACAGCTTCAAGGAGACACTCAAGCCCTGCACTGCAATTCAATCATCTTTC TCACAATCTTCTTCAACACGTTCGTACAATTTCGACACAAAATCTGTAAACCCTAGAAAA CCCCCTAAATCTTCTTTGTCCCAGCAACTTCTACGACTCGAGGATCACACTTCTTTGCTT CAAACTCAACCACCACAAACTCCCAATAAGCAGAACCATTTTGATTTGAAAAGCAAATAT GAAAAATCAGAGGAGGAGGAAGAAGAAGAAGAAGAAAAGCCCGTTGGGTTTGGGAGGCCC AAATTGGATTTATTATTGCTAGATCAAACAGGACCTTACGAGCCTTTGGTTCTGTCTTCA CCGGGTCAAAAGCCTGTTGTCCAGGTTCCAGCATCTATAAACTGTAGGCTTTTGGAGCAT CAACGAGCAGGAGTGAAATTTTTGTATAGCTTGTATCAGAATAATCATGGAGGAGTTCTT GGAGATGATATGGGACTTGGTAAAACCATCCAAAGCATTGCATTCTTAGCTGCTGTATTT GGTAAGGATGGAGACTTACCTGAATCAACAGTCTCGAAGGAACACCCAAGAACAAGGGTC CCTGTACTAATAATTTGTCCCTCTTCTTTGATCCACAACTGGGAAAATGAGTTTTCCAAG TGGGCAACATTTAGTGTTTGCATTTATCACGGGCCAAACCGTGATTTAATGATTGACAGA CTAGAAGCACGTGGAGTGGAGATACTTATAACCAGTTTTGATACATACAGAATCCATGGA CACATTTTATCAGATGTTGATTGGGAGATTGTGATTATTGATGAGGCTCATCGGCTTAAG AATGAGAAATCAAAACTGTACAAGGCATGTTTAGCAATTAAGACCCTAAAACGTTATGGT CTTACAGGAACAATAATGCAGAATAAATTAATGGAATTGTTCAACCTGTTCGACTGGGTG ATACCCGGTTGCTTGGGGACACGTGAACACTTCCGAGAATTTTACGATGAGCCCCTTAAA CATGGTCAGCGATCAAGTGCTCCAGATAGATTTGTTCGAGTTGCTGATGAGCGAAAACAG CACTTAGTATCAGTTCTGCACAAATATTTGTTAAGAAGGATAAAGGAGGAAACTATTGGA CATCTCATGTTGGGGAAGGAAGATAATGTTGTATTTTGTGCAATGAGTGAACTGCAAAAA CGGGTTTATCAGAGAATGCTACAGTTACCTGAGGTACGATGCCTTATCAATAAGGATCTC CCTTGTAGTTGTGGAAGCCCTCTCAAGCAAGTCGAATGTTGCAGAAGGACGGTTCCAGAT GGTATCATCTGGTCTTACCTTCACAGGGACAATCCAGATGGTTGTGATTCATGCCCTTAT TGTGTCGTTCTTCCTTGTCTCATGAAGCTCCAGCAGATAAGCAATCACTTGGAGCTTATC AAGCCTAATCCAAGGGATGATCCAGATAAACAAAGAAAAGATACAGAATTTGCTGCTGCT GTATTTGGTAAGGACATTGATTTGGTAGGAGGACATACTCAGAATAAGAGTTTCTTGGGC TTAAGTAATGTTGAACATTGCGGGAAAATGAGAGCATTGGAGAAACTAATGTCCTCTTGG GTTTCACAAGGTGACAAGATTCTTCTTTTCAGCTATTCTGTAAGGATGCTGGACATACTT GAGAAATTTATTATACGCAAAGGCTATGGCTTTTCAAGGCTTGATGGTTCCACCCCAACT GGCCTGCGCCAGTCTCTAGTCGACGACTTCAACTCTAGTCCTAGCAAACAGGTGTTCCTT ATATCAACAAAAGCTGGTGGACTTGGCCTCAACCTCGTTAGTGCAAATCGTGTAGTGATA TTTGATCCAAATTGGAATCCTGCCCAAGATTTGCAGGCCCAGGACAGATCATTCCGATTT GGACAGAGGCGGCATGTTGTTGTTTTCCGCTTACTTGCGGCCGGTTCTCTTGAAGAACTT GTTTACACTCGTCAGGTCTACAAACAGCAGTTAACAAACATTGCTGTCTCTGGAAAAATG GAAAAACGCTATTTTGAGGGAGTTCAGGATTGTAAGGAGTTTCAAGGGGAGCTATTCGGT ATCTGCAATCTTTTCAGAGATCTATCTGACAAACTCTTCACAAGTGAGATCATTGAATTA CATGAAAACAAGAGAAAGGAAGATGGAACTCATTCAAAACAGGATTTGAGTGGGATGTAT TTTGTTCCTGAGAAAGAAATAACTACAGCATCTTTGGTGGCACCTGAAAGCAGTAAACAT AAAGAAGAGGAGGGCAGAGCAGTTGCTCCAATGCTTGAACACCTCGGTATTGTATATGCT CATCGGTTTGAAGACATTGTTGATCTTGGACCAGCAGTGACGAAAGAGAAAAAAGAACAG ACTGTGCATCTAAATAATGCTCCAGGGTTGCCAGAGTGTTCAACCGTTGGGAAGAGGAAA TCAGATGCCATAACTGGGAAGGAGAATGTAGGAACTGGCAATCCTATAAAGATGCGCAAA AAGAACCAATTTAGCCTCATTGCCTGTTTCATGGGCATGGAAGAGGTTCAGTTTAGCAAA TGGCTCTTATCTGCAACTCCAGCAGAGCGTGAAAAGGTACTAAAAGATTATCATAAGGAG AAAGGATAA

Peptide Sequence

PEP ID	XP_016440493.1
PEP Infomation	PREDICTED: switch 2-like [Nicotiana tabacum]
Sequence	MSLNSFKETLKPCTAIQSSFSQSSSTRSYNFDTKSVNPRKPPKSSLSQQLLRLEDHTSLL QTQPPQTPNKQNHFDLKSKYEKSEEEEEEEEEKPVGFGRPKLDLLLLDQTGPYEPLVLSS PGQKPVVQVPASINCRLLEHQRAGVKFLYSLYQNNHGGVLGDDMGLGKTIQSIAFLAAVF GKDGDLPESTVSKEHPRTRVPVLIICPSSLIHNWENEFSKWATFSVCIYHGPNRDLMIDR LEARGVEILITSFDTYRIHGHILSDVDWEIVIIDEAHRLKNEKSKLYKACLAIKTLKRYG LTGTIMQNKLMELFNLFDWVIPGCLGTREHFREFYDEPLKHGQRSSAPDRFVRVADERKQ HLVSVLHKYLLRRIKEETIGHLMLGKEDNVVFCAMSELQKRVYQRMLQLPEVRCLINKDL PCSCGSPLKQVECCRRTVPDGIIWSYLHRDNPDGCDSCPYCVVLPCLMKLQQISNHLELI KPNPRDDPDKQRKDTEFAAAVFGKDIDLVGGHTQNKSFLGLSNVEHCGKMRALEKLMSSW VSQGDKILLFSYSVRMLDILEKFIIRKGYGFSRLDGSTPTGLRQSLVDDFNSSPSKQVFL ISTKAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQRRHVVVFRLLAAGSLEEL VYTRQVYKQQLTNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIEL HENKRKEDGTHSKQDLSGMYFVPEKEITTASLVAPESSKHKEEEGRAVAPMLEHLGIVYA HRFEDIVDLGPAVTKEKKEQTVHLNNAPGLPECSTVGKRKSDAITGKENVGTGNPIKMRK KNQFSLIACFMGMEEVQFSKWLLSATPAEREKVLKDYHKEKG

Transcript Sequence

Gene sequence data has not been registered.